IMPORTANT Notice regarding publications and OSUMSC

NIH funded research projects that use the Oregon State University Mass Spectrometry Facility (OSUMSC) and publish mass spectrometry results need to acknowledge the NIH instrument Grant (see below) and the OSUMSC.

Orbitrap Fusion Lumos -NIH # 1S10OD020111-01

Waters Ion Mobility ToF Mass Spectrometer – NIH #1S10RR025628-01

Applied Biosystems 4000Qtrap- NIH # 1S10RR022589-01

ABSciex Triple ToF 5600-NIH #1S10RR027878-01

 

Mass Spectrometry Center Publications_2018

Ahn, S., Magana, A. A., Bozarth, C., Shepardson, J., Morre, J., Dreher, T., & Maier, C. S. (2018). Integrated identification and quantification of cyanobacterial toxins from Pacific Northwest freshwaters by Liquid Chromatography and High-resolution Mass Spectrometry. J Mex Chem Soc, 62(2). PMCID: PMC6133267

Axton, E. R., Cristobal, E., Choi, J., Miranda, C. L., & Stevens, J. F. (2018). Metabolomics-Driven Elucidation of Cellular Nitrate Tolerance Reveals Ascorbic Acid Prevents Nitroglycerin-Induced Inactivation of Xanthine Oxidase. Frontiers in Pharmacology, 9, 1085. PMCID: PMC6167911

Babrak, L., & Bermudez, L. E. (2018). Response of the respiratory mucosal cells to mycobacterium avium subsp. Hominissuis microaggregate. Arch Microbiol, 200(5), 729-742. PMID: 29383404

Bayissi Bading-Taikaa, T. A., Armando Alcazar Maganad, Jaewoo Choi,, Michael Ouanesisouk, E. R. S. T., Lisa A. Lione, Claudia S. Maier,, & Gerd Bobe, J. R., Cristobal L. Miranda and Jan F. Stevens. (2018). Phytochemical characterization of Tabernanthe iboga root bark and its effects on dysfunctional metabolism and cognitive performance in high-fat-fed C57BL/6J mice. Journal of Food Bioactives, 3. PMCID: PMC6301038

Brady, J. V., Troyer, R. M., Ramsey, S. A., Leeper, H., Yang, L., Maier, C. S., Goodall, C. P., Ruby, C. E., Albarqi, H. A. M., Taratula, O., & Bracha, S. (2018). A Preliminary Proteomic Investigation of Circulating Exosomes and Discovery of Biomarkers Associated with the Progression of Osteosarcoma in a Clinical Model of Spontaneous Disease. Transl Oncol, 11(5), 1137-1146. PMCID: PMC6077151

Choi, J., Yin, T., Shinozaki, K., Lampe, J. W., Stevens, J. F., Becker, L. B., & Kim, J. (2018). Comprehensive analysis of phospholipids in the brain, heart, kidney, and liver: brain phospholipids are least enriched with polyunsaturated fatty acids. Mol Cell Biochem, 442(1-2), 187-201. PMCID: PMC5882520

Curran, K. M., Bracha, S., Wong, C. P., Beaver, L. M., Stevens, J. F., & Ho, E. (2018). Sulforaphane absorption and histone deacetylase activity following single dosing of broccoli sprout supplement in normal dogs. Vet Med Sci. PMCID: PMC6236138

Danelishvili, L., Rojony, R., Carson, K. L., Palmer, A. L., Rose, S. J., & Bermudez, L. E. (2018). Mycobacterium avium subsp. hominissuis effector MAVA5_06970 promotes rapid apoptosis in secondary-infected macrophages during cell-to-cell spread. Virulence, 9(1), 1287-1300. PMCID: PMC6177253

Demers-Mathieu, V., Underwood, M. A., Beverly, R. L., & Dallas, D. C. (2018). Survival of Immunoglobulins from Human Milk to Preterm Infant Gastric Samples at 1, 2, and 3 h Postprandial. Neonatology, 114(3), 242-250. PMCID: PMC6217945

Demers-Mathieu, V., Underwood, M. A., Beverly, R. L., Nielsen, S. D., & Dallas, D. C. (2018). Comparison of Human Milk Immunoglobulin Survival during Gastric Digestion between Preterm and Term Infants. Nutrients, 10(5).  PMCID: PMC5986510

Dressler, J. J., Teraoka, M., Espejo, G. L., Kishi, R., Takamuku, S., Gomez-Garcia, C. J., Zakharov, L. N., Nakano, M., Casado, J., & Haley, M. M. (2018). Thiophene and its sulfur inhibit indenoindenodibenzothiophene diradicals from low-energy lying thermal triplets. Nat Chem, 10(11), 1134-1140. PMID: 30224686

Everman, J. L., Danelishvili, L., Flores, L. G., & Bermudez, L. E. (2018). MAP1203 Promotes Mycobacterium avium Subspecies paratuberculosis Binding and Invasion to Bovine Epithelial Cells. Front Cell Infect Microbiol, 8, 217. PMCID: PMC6030366

Eytel, L. M., Brueckner, A. C., Lohrman, J. A., Haley, M. M., Cheong, P. H., & Johnson, D. W. (2018). Conformationally flexible arylethynyl bis-urea receptors bind disparate oxoanions with similar, high affinities. Chem Commun (Camb), 54(94), 13208-13211. PMID: 30298881

Goswami, S., Harada, K., El-Mansy, M. F., Lingampally, R., & Carter, R. G. (2018). Enantioselective Synthesis of (-)-Halenaquinone. Angew Chem Int Ed Engl, 57(29), 9117-9121. PMID: 29920904

Gray, N. E., Magana, A. A., Lak, P., Wright, K. M., Quinn, J., Stevens, J. F., Maier, C. S., & Soumyanath, A. (2018). Centella asiatica: phytochemistry and mechanisms of neuroprotection and cognitive enhancement. Phytochemistry Reviews, 17(1), 161-194.

Housley, L., Magana, A. A., Hsu, A., Beaver, L. M., Wong, C. P., Stevens, J. F., Choi, J., Jiang, Y., Bella, D., Williams, D. E., Maier, C. S., Shannon, J., Dashwood, R. H., & Ho, E. (2018). Untargeted Metabolomic Screen Reveals Changes in Human Plasma Metabolite Profiles Following Consumption of Fresh Broccoli Sprouts. Mol Nutr Food Res. PMCID: PMC6310001

Kubglomsong, S., Theerakulkait, C., Reed, R. L., Yang, L., Maier, C. S., & Stevens, J. F. (2018). Isolation and Identification of Tyrosinase-Inhibitory and Copper-Chelating Peptides from Hydrolyzed Rice-Bran-Derived Albumin. J Agric Food Chem, 66(31), 8346-8354. PMID: 30016586

Li, X., & Carter, R. G. (2018a). Pummerer Cyclization Revisited: Unraveling of Acyl Oxonium Ion and Vinyl Sulfide Pathways. Org Lett, 20(18), 5541-5545. PMID: 30199264

Li, X., & Carter, R. G. (2018b). Total Syntheses of Aromatic Abietane Diterpenoids Utilizing Advances in the Pummerer Rearrangement. Org Lett, 20(18), 5546-5549. PMID: 30199260

Miranda, C. L., Johnson, L. A., de Montgolfier, O., Elias, V. D., Ullrich, L. S., Hay, J. J., Paraiso, I. L., Choi, J., Reed, R. L., Revel, J. S., Kioussi, C., Bobe, G., Iwaniec, U. T., Turner, R. T., Katzenellenbogen, B. S., Katzenellenbogen, J. A., Blakemore, P. R., Gombart, A. F., Maier, C. S., Raber, J., & Stevens, J. F. (2018). Non-estrogenic Xanthohumol Derivatives Mitigate Insulin Resistance and Cognitive Impairment in High-Fat Diet-induced Obese Mice. Sci Rep, 8(1), 613. PMCID: PMC5766630

Nielsen, S. D., Beverly, R. L., & Dallas, D. C. (2018). Milk Proteins Are Predigested Within the Human Mammary Gland. J Mammary Gland Biol Neoplasia. PMCID: PMC5856648

Nielsen, S. D., Beverly, R. L., Underwood, M. A., & Dallas, D. C. (2018). Release of functional peptides from mother's milk and fortifier proteins in the premature infant stomach. PLoS One, 13(11), e0208204. PMCID: PMC6264471

O'Connor, A., Konda, V., Reed, R. L., Christensen, J. M., Stevens, J. F., & Contractor, N. (2018). Rice Protein Matrix Enhances Circulating Levels of Xanthohumol Following Acute Oral Intake of Spent Hops in Humans. Mol Nutr Food Res. PMID: 29322620

Rewerts, J. N., Morre, J. T., Simonich, S. L. M., & Field, J. A. (2018). In-Vial Extraction Large Volume Gas Chromatography Mass Spectrometry for Analysis of Volatile PFASs on Papers and Textiles. Environ Sci Technol, 52(18), 10609-10616. PMID: 30148348

Selamassakul, O., Laohakunjit, N., Kerdchoechuen, O., Yang, L. P., & Maier, C. S. (2018). Isolation and characterisation of antioxidative peptides from bromelain-hydrolysed brown rice protein by proteomic technique. Process Biochemistry, 70, 179-187.

Yang, L., Hernandez, R. V., Tran, T. N., Nirudodhi, S., Beck, W. H. J., Maier, C. S., & Narayanaswami, V. (2018). Ordered opening of LDL receptor binding domain of human apolipoprotein E3 revealed by hydrogen/deuterium exchange mass spectrometry and fluorescence spectroscopy. Biochim Biophys Acta Proteins Proteom, 1866(11), 1165-1173. PMID: 30282614

Zandkarimi, F., Vanegas, J., Fern, X., Maier, C. S., & Bobe, G. (2018). Metabotypes with elevated protein and lipid catabolism and inflammation precede clinical mastitis in prepartal transition dairy cows. J Dairy Sci, 101(6), 5531-5548. PMID: 29573799

Zhang, Y., Wong, C. P., Gallo, R. L., Gamboa, A. R., Olson, D. A., Lowry, M. B., Fantacone, M. L., Maier, C. S., Stevens, J. F., Turner, R. T., Iwaniec, U. T., & Gombart, A. F. (2018). Knockout and Human Transgenie Mouse Models Reveal a Role for the Cathelicidin Antimicrobial Peptide (Camp/CAMP) Gene in Bone Metabolism. Journal of Bone and Mineral Research, 33, 351-351.

Mass Spectrometry Center Publications_2017

Barker, J. E., Frederickson, C. K., Jones, M. H., Zakharov, L. N., & Haley, M. M. (2017). Synthesis and Properties of Quinoidal Fluorenofluorenes. Org Lett, 19(19), 5312-5315. PMID: 28901775

Barzen-Hanson, K. A., Roberts, S. C., Choyke, S., Oetjen, K., McAlees, A., Riddell, N., McCrindle, R., Ferguson, P. L., Higgins, C. P., & Field, J. A. (2017). Discovery of 40 Classes of Per- and Polyfluoroalkyl Substances in Historical Aqueous Film-Forming Foams (AFFFs) and AFFF-Impacted Groundwater. Environ Sci Technol, 51(4), 2047-2057. PMID: 28098989

Chibwe, L., Davie-Martin, C. L., Aitken, M. D., Hoh, E., & Massey Simonich, S. L. (2017). Identification of polar transformation products and high molecular weight polycyclic aromatic hydrocarbons (PAHs) in contaminated soil following bioremediation. Sci Total Environ, 599-600, 1099-1107. PMID: 28511355

DenHerder, J. M., Reed, R. L., Sargent, J. L., Bobe, G., Stevens, J. F., & Diggs, H. E. (2017). Effects of Time and Storage Conditions on the Chemical and Microbiologic Stability of Diluted Buprenorphine for Injection. J Am Assoc Lab Anim Sci, 56(4), 457-461. PMCID: PMC5517336

Dressler, J. J., Zhou, Z., Marshall, J. L., Kishi, R., Takamuku, S., Wei, Z., Spisak, S. N., Nakano, M., Petrukhina, M. A., & Haley, M. M. (2017). Synthesis of the Unknown Indeno[1,2-a]fluorene Regioisomer: Crystallographic Characterization of Its Dianion. Angew Chem Int Ed Engl. PMID: 28985444

Ellinwood, D. C., El-Mansy, M. F., Plagmann, L. S., Stevens, J. F., Maier, C. S., Gombart, A. F., & Blakemore, P. R. (2017). Total Synthesis of [13 C]2 -, [13 C]3 -, and [13 C]5 -Isotopomers of Xanthohumol, the Principal Prenylflavonoid From Hops. J Labelled Comp Radiopharm. 60(14):639-648. PMCID: PMC5832448

Eytel, L. M., Gilbert, A. K., Gorner, P., Zakharov, L. N., Johnson, D. W., & Haley, M. M. (2017). Do CH-Anion and Anion-pi Interactions Alter the Mechanism of 2:1 Host-Guest Complexation in Arylethynyl Monourea Anion Receptors? Chemistry, 23(17), 4051-4054. PMCID: PMC5560113

Johnson, L. A., Torres, E. R., Impey, S., Stevens, J. F., & Raber, J. (2017). Apolipoprotein E4 and Insulin Resistance Interact to Impair Cognition and Alter the Epigenome and Metabolome. Sci Rep, 7, 43701. PMCID: PMC5341123

Li, S., Teegarden, A., Bauer, E. M., Choi, J., Messaddeq, N., Hendrix, D. A., Ganguli-Indra, G., Leid, M., & Indra, A. K. (2017). Transcription Factor CTIP1/ BCL11A Regulates Epidermal Differentiation and Lipid Metabolism During Skin Development. Sci Rep, 7(1), 13427. PMCID: PMC5647389

McDougall, M., Choi, J., Kim, H. K., Bobe, G., Stevens, J. F., Cadenas, E., Tanguay, R., & Traber, M. G. (2017a). Lethal dysregulation of energy metabolism during embryonic vitamin E deficiency. Free Radic Biol Med, 104, 324-332. PMCID: PMC5344700

McDougall, M., Choi, J., Kim, H. K., Bobe, G., Stevens, J. F., Cadenas, E., Tanguay, R., & Traber, M. G. (2017b). Lipid quantitation and metabolomics data from vitamin E-deficient and -sufficient zebrafish embryos from 0 to 120 hours-post-fertilization. Data Brief, 11, 432-441. PMCID: PMC5334496

McDougall, M., Choi, J., Magnusson, K., Truong, L., Tanguay, R., & Traber, M. G. (2017). Chronic vitamin E deficiency impairs cognitive function in adult zebrafish via dysregulation of brain lipids and energy metabolism. Free Radic Biol Med, 112, 308-317. PMCID: PMC5629005

McDougall, M., Choi, J., Truong, L., Tanguay, R., & Traber, M. G. (2017). Vitamin E deficiency during embryogenesis in zebrafish causes lasting metabolic and cognitive impairments despite refeeding adequate diets. Free Radic Biol Med, 110, 250-260. PMCID: PMC5548191

Mellbye, B. L., Spieck, E., Bottomley, P. J., & Sayavedra-Soto, L. A. (2017). Acyl-Homoserine Lactone Production in Nitrifying Bacteria of the Genera Nitrosospira, Nitrobacter, and Nitrospira Identified via a Survey of Putative Quorum-Sensing Genes.  Appl Environ Microbiol. 2017 Oct 31;83(22) PMCID: PMC5666142

Mukherjee, S., Kapp, E. A., Lothian, A., Roberts, A. M., Vasil'ev, Y. V., Boughton, B. A., Barnham, K. J., Kok, W. M., Hutton, C. A., Masters, C. L., Bush, A. I., Beckman, J. S., Dey, S. G., & Roberts, B. R. (2017). Characterization and Identification of Dityrosine Cross-Linked Peptides Using Tandem Mass Spectrometry. Analytical Chemistry, 89(11), 6136-6145. PMID: 28453255

Nielsen, S. D., Beverly, R. L., & Dallas, D. C. (2017). Peptides Released from Foremilk and Hindmilk Proteins by Breast Milk Proteases Are Highly Similar. Front Nutr, 4, 54. PMCID: PMC5673630

Perkins, M. J., Joye, S. B., & Field, J. A. (2017). Selective quantification of DOSS in marine sediment and sediment-trap solids by LC-QTOF-MS. Anal Bioanal Chem, 409(4), 971-978. PMID: 27888309

Poothong, S., Morre, J., Maier, C. S., & Reed, B. M. (2017). Metabolic changes and improved growth in micropropagated red raspberry "Indian summer" are tied to improved mineral nutrition. In Vitro Cellular & Developmental Biology-Plant, 53(6), 579-590.

Stevens, J. F., Revel, J. S., & Maier, C. S. (2017). Mitochondria-centric Review of Polyphenol Bioactivity in Cancer Models. Antioxid Redox Signal. PMCID: PMC6207154

Tresca, B. W., Brueckner, A. C., Haley, M. M., Cheong, P. H., & Johnson, D. W. (2017). Computational and Experimental Evidence of Emergent Equilibrium Isotope Effects in Anion Receptor Complexes. J Am Chem Soc, 139(11), 3962-3965. PMCID: PMC5364433

Troyer, R. M., Ruby, C. E., Goodall, C. P., Yang, L., Maier, C. S., Albarqi, H. A., Brady, J. V., Bathke, K., Taratula, O., Mourich, D., & Bracha, S. (2017). Exosomes from Osteosarcoma and normal osteoblast differ in proteomic cargo and immunomodulatory effects on T cells. Exp Cell Res. PMID: 28712929

 Mass Spectrometry Center Publications_2016

Brown, N. M., Mueller, R. S., Shepardson, J. W., Landry, Z. C., Morre, J. T., Maier, C. S., Hardy, F. J., & Dreher, T. W. (2016). Structural and functional analysis of the finished genome of the recently isolated toxic Anabaena sp. WA102. BMC Genomics, 17(1), 457. PMCID: PMC4907049

Chinison, J. J., Danelishvili, L., Gupta, R., Rose, S. J., Babrak, L. M., & Bermudez, L. E. (2016). Identification of Mycobacterium avium subsp. hominissuis secreted proteins using an in vitro system mimicking the phagosomal environment. BMC Microbiol, 16(1), 270. PMCID: PMC5103417

Fabilane, C. S., Nguyen, P. N., Hernandez, R. V., Nirudodhi, S., Duong, M., Maier, C. S., & Narayanaswami, V. (2016). Mechanism of Lipid Binding of Human Apolipoprotein E3 by Hydrogen/Deuterium Exchange/Mass Spectrometry and Fluorescence Polarization. Protein Pept Lett, 23(4), 404-413. PMID: 26902251

Hammers, M. D., Singh, L., Montoya, L. A., Moghaddam, A. D., & Pluth, M. D. (2016). Synthesis of Amino-ADT Provides Access to Hydrolytically Stable Amide-Coupled Hydrogen Sulfide Releasing Drug Targets. Synlett, 27(9), 1349-1353. PMCID: PMC4936786

Huang, L., Wickramasekara, S. I., Akinyeke, T., Stewart, B. S., Jiang, Y., Raber, J., & Maier, C. S. (2016). Ion mobility-enhanced MS(E)-based label-free analysis reveals effects of low-dose radiation post contextual fear conditioning training on the mouse hippocampal proteome. J Proteomics, 140, 24-36. PMCID: PMC5029422

J. L. Marshall, K. U., C. K. Frederickson, C. Schütt, A. M. Zeidell, K. P. Goetz, T. W. Finn, K. Jarolimek, L. N. Zakharov, C. Risko, R. Herges, O. D. Jurchescu and M. M. Haley. (2016). Indacenodibenzothiophenes: Synthesis, Optoelectronic Properties and Materials Applications of Molecules with Strong Antiaromatic Character. Chem. Sci., 7, 5547-5558. PMCID: PMC5207214

Johnson, L. A., Zuloaga, K. L., Kugelman, T. L., Mader, K. S., Morre, J. T., Zuloaga, D. G., Weber, S., Marzulla, T., Mulford, A., Button, D., Lindner, J. R., Alkayed, N. J., Stevens, J. F., & Raber, J. (2016). Amelioration of Metabolic Syndrome-Associated Cognitive Impairments in Mice via a Reduction in Dietary Fat Content or Infusion of Non-Diabetic Plasma. EBioMedicine, 3, 26-42. PMCID: PMC4739422

Kang, J. Y., Johnston, R. C., Snyder, K. M., Cheong, P. H., & Carter, R. G. (2016). Construction of Stereogenic alpha,alpha-Disubstituted Cycloalkanones via 1 degrees Amine Thiourea Dual Catalysis: Experimental Scope and Computational Analyses. J Org Chem, 81(9), 3629-3637. PMID: 27095132

Kirkwood, J. S., Miranda, C. L., Bobe, G., Maier, C. S., & Stevens, J. F. (2016). 18O-Tracer Metabolomics Reveals Protein Turnover and CDP-Choline Cycle Activity in Differentiating 3T3-L1 Pre-Adipocytes. PLoS One, 11(6), e0157118. PMCID: PMC4898700

Kuhn, N., Serrano, A., Abello, C., Arce, A., Espinoza, C., Gouthu, S., Deluc, L., & Arce-Johnson, P. (2016). Regulation of polar auxin transport in grapevine fruitlets (Vitis vinifera L.) and the proposed role of auxin homeostasis during fruit abscission. BMC Plant Biol, 16(1), 234. PMCID: PMC5084367

Marshall, J. L., O'Neal, N. J., Zakharov, L. N., & Haley, M. M. (2016). Synthesis and Characterization of Two Unsymmetrical Indenofluorene Analogues: Benzo[5,6]-s-indaceno[1,2-b]thiophene and Benzo[5,6]-s-indaceno[2,1-b]thiophene. J Org Chem, 81(9), 3674-3680. PMID: 27014864

McDougall, M. Q., Choi, J., Stevens, J. F., Truong, L., Tanguay, R. L., & Traber, M. G. (2016). Lipidomics and H2(18)O labeling techniques reveal increased remodeling of DHA-containing membrane phospholipids associated with abnormal locomotor responses in alpha-tocopherol deficient zebrafish (danio rerio) embryos. Redox Biol, 8, 165-174. PMCID: PMC4732018

Miranda, C. L., Elias, V. D., Hay, J. J., Choi, J., Reed, R. L., & Stevens, J. F. (2016). Xanthohumol improves dysfunctional glucose and lipid metabolism in diet-induced obese C57BL/6J mice. Arch Biochem Biophys, 599, 22-30. PMCID: PMC4875845

Mohamed F. EI-Mansy, J. Y. K., Rajinikanth Lingampally, Rich G. Carter. (2016). Proline Sulfonamide-Catalyzed, Domino Process for Asymmetric Synthesis of Amino- and Hydroxy-Substituted Bicyclo[2.2.2]octanes. Eur. J. Org. Chem. 150-157

Rose, S. J., & Bermudez, L. E. (2016). Identification of Bicarbonate as a Trigger and Genes Involved with Extracellular DNA Export in Mycobacterial Biofilms. MBio, 7(6). PMCID: PMC5142616

Rudebusch, G. E., Zafra, J. L., Jorner, K., Fukuda, K., Marshall, J. L., Arrechea-Marcos, I., Espejo, G. L., Ponce Ortiz, R., Gomez-Garcia, C. J., Zakharov, L. N., Nakano, M., Ottosson, H., Casado, J., & Haley, M. M. (2016). Diindeno-fusion of an anthracene as a design strategy for stable organic biradicals. Nat Chem, 8(8), 753-759. PMID: 27442280

Saha, M., Li, X., Collett, N. D., & Carter, R. G. (2016). Unified Synthesis of 10-Oxygenated Lycopodium Alkaloids: Impact of C10-Stereochemistry on Reactivity. J Org Chem, 81(14), 5963-5980. PMID: 27353498

Stevens, J. F., & Maier, C. S. (2016). The Chemistry of Gut Microbial Metabolism of Polyphenols. Phytochem Rev, 15(3), 425-444.

Tresca, B. W., Berryman, O. B., Zakharov, L. N., Johnson, D. W., & Haley, M. M. (2016). Anion-directed self-assembly of a 2,6-bis(2-anilinoethynyl)pyridine bis(amide) scaffold. Supramol Chem, 28(1-2), 37-44. PMCID: PMC4838391

Tzeng, S. C., & Maier, C. S. (2016). Label-Free Proteomics Assisted by Affinity Enrichment for Elucidating the Chemical Reactivity of the Liver Mitochondrial Proteome toward Adduction by the Lipid Electrophile 4-hydroxy-2-nonenal (HNE). Front Chem, 4, 2. PMCID: PMC4865762

Vonnegut, C. L., Shonkwiler, A. M., Zakharov, L. N., Haley, M. M., & Johnson, D. W. (2016). Harnessing solid-state packing for selective detection of chloride in a macrocyclic anionophore. Chem Commun (Camb), 52(61), 9506-9509. PMCID: PMC4973467

Watson, G. W., Wickramasekara, S., Fang, Y., Maier, C. S., Williams, D. E., Dashwood, R. H., Perez, V. I., & Ho, E. (2015). HDAC6 activity is not required for basal autophagic flux in metastatic prostate cancer cells. Exp Biol Med(Maywood). 241(11): 1177-85 PMCID: PMC4950308

Watanabe, K., Li, J., Veerasamy, N., Ghosh, A., & Carter, R. G. (2016). Stereoselective, Ag-Catalyzed Cyclizations To Access Polysubstituted Pyran Ring Systems: Synthesis of C1-C12 Subunit of Madeirolide A. Org Lett, 18(8), 1744-1747. PMID: 27031993

Wattanasiritham, L., Theerakulkait, C., Wickramasekara, S., Maier, C. S., & Stevens, J. F. (2016). Isolation and identification of antioxidant peptides from enzymatically hydrolyzed rice bran protein. Food Chem, 192, 156-162. PMID: 26304333

Mass Spectrometry Center Publications_2015

Atwell, L. L., Hsu, A., Wong, C. P., Stevens, J. F., Bella, D., Yu, T. W., Pereira, C. B., Lohr, C. V., Christensen, J. M., Dashwood, R. H., Williams, D. E., Shannon, J., & Ho, E. (2015). Absorption and chemopreventive targets of sulforaphane in humans following consumption of broccoli sprouts or a myrosinase-treated broccoli sprout extract. Mol Nutr Food Res, 59(3), 424-433. PMCID: PMC4394840

Axton, E. R., Hardardt, E. A., & Stevens, J. F. (2015). Stable isotope-assisted LC-MS/MS monitoring of glyceryl trinitrate bioactivation in a cell culture model of nitrate tolerance. J Chromatogr B Analyt Technol Biomed Life Sci. PMCID: PMC4909631

Babrak, L., Danelishvili, L., Rose, S. J., & Bermudez, L. E. (2015). Microaggregate-associated protein involved in invasion of epithelial cells by Mycobacterium avium subsp. hominissuis. Virulence, 6(7), 694-703. PMCID: PMC4720229

Babrak, L., Danelishvili, L., Rose, S. J., Kornberg, T., & Bermudez, L. E. (2015). The environment of "Mycobacterium avium subsp. hominissuis" microaggregates induces synthesis of small proteins associated with efficient infection of respiratory epithelial cells. Infect Immun, 83(2), 625-636. PMCID: PMC4294266

Bailey, T. S., & Pluth, M. D. (2015). Reactions of isolated persulfides provide insights into the interplay between H2S and persulfide reactivity. Free Radic Biol Med, 89, 662-667. PMCID: PMC4684792

Berryman, O. B., Johnson, C. A., 2nd, Vonnegut, C. L., Fajardo, K. A., Zakharov, L. N., Johnson, D. W., & Haley, M. M. (2015). Solid-State Examination of Conformationally Diverse Sulfonamide Receptors Based on Bis(2-anilinoethynyl)pyridine, -Bipyridine, and -Thiophene. Cryst Growth Des, 15(3), 1502-1511. PMCID: PMC4577069

Choi, J., Leonard, S. W., Kasper, K., McDougall, M., Stevens, J. F., Tanguay, R. L., & Traber, M. G. (2015). Novel function of vitamin E in regulation of zebrafish (Danio rerio) brain lysophospholipids discovered using lipidomics. J Lipid Res, 56(6), 1182-1190. PMCID: PMC4442875

Diaz-Gonzalez, F., Milano, M., Olguin-Araneda, V., Pizarro-Cerda, J., Castro-Cordova, P., Tzeng, S. C., Maier, C. S., Sarker, M. R., & Paredes-Sabja, D. (2015). Protein composition of the outermost exosporium-like layer of Clostridium difficile 630 spores. J Proteomics, 123, 1-13. PMID: 25849250

Elie, M. R., Choi, J., Nkrumah-Elie, Y. M., Gonnerman, G. D., Stevens, J. F., & Tanguay, R. L. (2015). Metabolomic analysis to define and compare the effects of PAHs and oxygenated PAHs in developing zebrafish. Environ Res, 140, 502-510. PMCID: PMC4492807

Hammers, M. D., Taormina, M. J., Cerda, M. M., Montoya, L. A., Seidenkranz, D. T., Parthasarathy, R., & Pluth, M. D. (2015). A Bright Fluorescent Probe for H2S Enables Analyte-Responsive, 3D Imaging in Live Zebrafish Using Light Sheet Fluorescence Microscopy. J Am Chem Soc, 137(32), 10216-10223. PMCID: PMC4543995

Harper, T. A., Jr., Morre, J., Lauer, F. T., McQuistan, T. J., Hummel, J. M., Burchiel, S. W., & Williams, D. E. (2015). Analysis of dibenzo[def,p]chrysene-deoxyadenosine adducts in wild-type and cytochrome P450 1b1 knockout mice using stable-isotope dilution UHPLC-MS/MS. Mutat Res Genet Toxicol Environ Mutagen, 782, 51-56. PMCID: PMC4395865

J. L. Marshall, G. E. R., L. N. Zakharov and M. M. Haley. (2015). Synthesis and Properties of Fully Conjugated Indacenediselenophene and Diindenoselenophene Derivatives. Tetrahedron Lett., 56, 3235-3239.

Khalifa, M. M., Bodner, M. J., Berglund, J. A., & Haley, M. M. (2015). Synthesis of N-substituted aryl amidines by strong base activation of amines. Tetrahedron Lett, 56(27), 4109-4111. PMCID: PMC4470429

Montezano, D., Meek, L., Gupta, R., Bermudez, L. E., & Bermudez, J. C. (2015). Flux Balance Analysis with Objective Function Defined by Proteomics Data-Metabolism of Mycobacterium tuberculosis Exposed to Mefloquine. PLoS One, 10(7), e0134014. PMCID: PMC4517854

Montoya, L. A., Shen, X., McDermott, J. J., Kevil, C. G., & Pluth, M. D. (2015). Mechanistic investigations reveal that dibromobimane extrudes sulfur from biological sulfhydryl sources other than hydrogen sulfidedaggerElectronic supplementary information (ESI) available: Experimental details, pH stability data for BTE, NMR spectra. See DOI: 10.1039/c4sc01875cClick here for additional data file. Chem Sci, 6(1), 294-300. PMCID: PMC4302847

Roemeling, M. D., Williams, J., Beckman, J. S., & Hurst, J. K. (2015). Imidazole catalyzes chlorination by unreactive primary chloramines. Free Radic Biol Med, 82, 167-178. PMCID: PMC4387080

Siboni, R. B., Bodner, M. J., Khalifa, M. M., Docter, A. G., Choi, J. Y., Nakamori, M., Haley, M. M., & Berglund, J. A. (2015). Biological Efficacy and Toxicity of Diamidines in Myotonic Dystrophy Type 1 Models. J Med Chem, 58(15), 5770-5780. PMCID: PMC4972181

Sommer, S. K., Henle, E. A., Zakharov, L. N., & Pluth, M. D. (2015). Selection for a Single Self-Assembled Macrocycle from a Hybrid Metal-Ligand Hydrogen-Bonded (MLHB) Ligand Subunit. Inorg Chem, 54(14), 6910-6916. PMID: 26146881

Sommer, S. K., Zakharov, L. N., & Pluth, M. D. (2015). Design, synthesis, and characterization of hybrid metal-ligand hydrogen-bonded (MLHB) supramolecular architectures. Inorg Chem, 54(4), 1912-1918. PMID: 25611134

Tresca, B. W., Hansen, R. J., Chau, C. V., Hay, B. P., Zakharov, L. N., Haley, M. M., & Johnson, D. W. (2015). Substituent Effects in CH Hydrogen Bond Interactions: Linear Free Energy Relationships and Influence of Anions. J Am Chem Soc, 137(47), 14959-14967. PMCID: PMC4977030

Vining, O. B., Medina, R. A., Mitchell, E. A., Videau, P., Li, D., Serrill, J. D., Kelly, J. X., Gerwick, W. H., Proteau, P. J., Ishmael, J. E., & McPhail, K. L. (2015). Depsipeptide companeramides from a Panamanian marine cyanobacterium associated with the coibamide producer. J Nat Prod, 78(3), 413-420. PMCID:

PMC4380200

Voinov, V. G., Hoffman, P. D., Bennett, S. E., Beckman, J. S., & Barofsky, D. F. (2015). Electron Capture Dissociation of Sodium-Adducted Peptides on a Modified Quadrupole/Time-of-Flight Mass Spectrometer. J Am Soc Mass Spectrom, 26(12), 2096-2104. PMID: 26266643

Vonnegut, C. L., Shonkwiler, A. M., Khalifa, M. M., Zakharov, L. N., Johnson, D. W., & Haley, M. M. (2015). Facile Synthesis and Properties of 2-lambda(5)-Phosphaquinolines and 2-lambda(5)-Phosphaquinolin-2-ones. Angew Chem Int Ed Engl, 54(45), 13318-13322. PMCID: PMC4624000

Wang, X., Chandrabose, R. S., Chun, S. E., Zhang, T., Evanko, B., Jian, Z., Boettcher, S. W., Stucky, G. D., & Ji, X. (2015). High Energy Density Aqueous Electrochemical Capacitors with a KI-KOH Electrolyte. ACS Appl Mater Interfaces, 7(36), 19978-19985. PMID: 26310453

Watson, G. W., Wickramasekara, S., Fang, Y., Palomera-Sanchez, Z., Maier, C. S., Williams, D. E., Dashwood, R. H., Perez, V. I., & Ho, E. (2015). Analysis of autophagic flux in response to sulforaphane in metastatic prostate cancer cells. Mol Nutr Food Res, 59(10), 1954-1961. PMCID: PMC4651621

Watson, G. W., Wickramasekara, S., Maier, C. S., Williams, D. E., Dashwood, R. H., & Ho, E. (2015). Assessment of global proteome in LNCaP cells by 2D-RP/RP LC-MS/MS following sulforaphane exposure. EuPA Open Proteom, 9, 34-40. PMCID: PMC4666544

Mass Spectrometry Center Publications_2014

Alwedi, E. Z., L. N.; Blakemore, P. R. (2014). Chain Extension of Boronic Esters with Lithiooxiranes Generated by Sulfoxide-Metal Exchange: Stereocontrolled Access to 2°/2°, 2°/3°, and 3°/3° Vicinal Diols and Related Compounds. Eur. J. Org. Chem., 6643-6648.

Bailey, T. S., Zakharov, L. N., & Pluth, M. D. (2014). Understanding hydrogen sulfide storage: probing conditions for sulfide release from hydrodisulfides. J Am Chem Soc, 136(30), 10573-10576. PMCID: PMC4120993

Barsamian, A. L., Perkins, M. J., Field, J. A., & Blakemore, P. R. (2014). Regioselective syntheses of [13C]4-labelled sodium 1-carboxy-2-(2-ethylhexyloxycarbonyl)ethanesulfonate and sodium 2-carboxy-1-(2-ethylhexyloxycarbonyl)ethanesulfonate from [13C]4-maleic anhydride. J Labelled Comp Radiopharm, 57(5), 397-401. PMCID: PMC4167582

Bracha, S., McNamara, M., Hilgart, I., Milovancev, M., Medlock, J., Goodall, C., Wickramasekara, S., & Maier, C. S. (2014). A multiplex biomarker approach for the diagnosis of transitional cell carcinoma from canine urine. Anal Biochem, 455, 41-47. PMCID: PMC4874471

Carini, P., Campbell, E. O., Morre, J., Sanudo-Wilhelmy, S. A., Thrash, J. C., Bennett, S. E., Temperton, B., Begley, T., & Giovannoni, S. J. (2014). Discovery of a SAR11 growth requirement for thiamin's pyrimidine precursor and its distribution in the Sargasso Sea. ISME J, 8(8), 1727-1738. PMCID: PMC4817611

Duesterdieck-Zellmer, K. F., Moneta, L., Ott, J. F., Larson, M. K., Gorman, E. M., Hunter, B., Lohr, C. V., Payton, M. E., Morre, J. T., & Maier, C. S. (2014). Effects of low and high dose intraarticular tiludronate on synovial fluid and clinical variables in healthy horses-a preliminary investigation. PeerJ, 2, e534. PMCID: PMC4157236

Engle, J. M., Singh, P. S., Vonnegut, C. L., Zakharov, L. N., Johnson, D. W., & Haley, M. M. (2014). Synthesis and solid-state structures of a macrocyclic receptor based on the 2,6-bis(2-anilinoethynyl)pyridine scaffold. CrystEngComm, 16(18), 3703-3706. PMCID: PMC4284647

Farley, S. M., Leonard, S. W., Stevens, J. F., & Traber, M. G. (2014). Deuterium-labeled phylloquinone fed to alpha-tocopherol-injected rats demonstrates sensitivity of low phylloquinone-containing tissues to menaquinone-4 depletion. Mol Nutr Food Res, 58(8), 1610-1619. PMCID: PMC4183557

Frederickson, C. K., & Haley, M. M. (2014). Synthesis and optoelectronic properties of indeno[1,2-b]fluorene-6,12-dione donor-acceptor-donor triads. J Org Chem, 79(22), 11241-11245. PMID: 25329864

G.E. Rudebusch, A. G. F., H.A. Henthorn, C.L. Vonnegut, L.N. Zakharov and M.M. Haley. (2014). Quinoidal Diindenothienoacenes: Synthesis and Properties of New Functional Organic Materials. Chem. Sci., 5, 3627-3633.

Gray, N. E., Morre, J., Kelley, J., Maier, C. S., Stevens, J. F., Quinn, J. F., & Soumyanath, A. (2014). Caffeoylquinic acids in Centella asiatica protect against amyloid-beta toxicity. J Alzheimers Dis, 40(2), 359-373. PMCID: PMC3973491

Hammers, M. D., & Pluth, M. D. (2014). Ratiometric measurement of hydrogen sulfide and cysteine/homocysteine ratios using a dual-fluorophore fragmentation strategy. Analytical Chemistry, 86(14), 7135-7140. PMCID: PMC4100788

Henderson, M. C., Siddens, L. K., Krueger, S. K., Stevens, J. F., Kedzie, K., Fang, W. K., Heidelbaugh, T., Nguyen, P., Chow, K., Garst, M., Gil, D., & Williams, D. E. (2014). Flavin-containing monooxygenase S-oxygenation of a series of thioureas and thiones. Toxicol Appl Pharmacol, 278(2), 91-99. PMCID: PMC4110205

Intanon, S., Reed, R. L., Stevens, J. F., Hulting, A. G., & Mallory-Smith, C. A. (2014). Identification and phytotoxicity of a new glucosinolate breakdown product from Meadowfoam (Limnanthes alba) seed meal. J Agric Food Chem, 62(30), 7423-7429. PMID: 24998843

Legette, L., Karnpracha, C., Reed, R. L., Choi, J., Bobe, G., Christensen, J. M., Rodriguez-Proteau, R., Purnell, J. Q., & Stevens, J. F. (2014). Human pharmacokinetics of xanthohumol, an antihyperglycemic flavonoid from hops. Mol Nutr Food Res, 58(2), 248-255. PMCID: PMC4371792

Luo, W., Wang, B., Heron, C. G., Allen, M. J., Morre, J., Maier, C. S., Stickle, W. F., & Ji, X. (2014). Pyrolysis of cellulose under ammonia leads to nitrogen-doped nanoporous carbon generated through methane formation. Nano Lett, 14(4), 2225-2229. PMID: 24679142

Martha Rosales-Castro1, R. F. G.-L., Young-Soo Bae, Jin Kgu Kim, Jeff Morre, and Joseph J. Karchesy. . (2014). Characterization and Antioxidant Properties of the Condensed Tannins from Alaska Cedar Inner Bark. Rec. Nat. Prod., 8(3), 217-227.

McGrath, J. M., & Pluth, M. D. (2014a). Linear free energy relationships reveal structural changes in hydrogen-bonded host-guest interactions. J Org Chem, 79(23), 11797-11801. PMCID: PMC4260963

McGrath, J. M., & Pluth, M. D. (2014b). Understanding the effects of preorganization, rigidity, and steric interactions in synthetic barbiturate receptors. J Org Chem, 79(2), 711-719. PMCID: PMC4002384

Minato, Y., Fassio, S. R., Kirkwood, J. S., Halang, P., Quinn, M. J., Faulkner, W. J., Aagesen, A. M., Steuber, J., Stevens, J. F., & Hase, C. C. (2014). Roles of the sodium-translocating NADH:quinone oxidoreductase (Na+-NQR) on vibrio cholerae metabolism, motility and osmotic stress resistance. PLoS One, 9(5), e97083. PMCID: PMC4014592

Montoya, L. A., & Pluth, M. D. (2014). Hydrogen sulfide deactivates common nitrobenzofurazan-based fluorescent thiol labeling reagents. Analytical Chemistry, 86(12), 6032-6039. PMCID: PMC4063329

Motorykin, I., Traber, M. G., Tanguay, R. L., & Maier, C. S. (2014). Proteome-driven elucidation of adaptive responses to combined vitamin E and C deficiency in zebrafish. J Proteome Res, 13(3), 1647-1656. PMCID: PMC3993953

Vasil'ev, Y. V., Tzeng, S. C., Huang, L., & Maier, C. S. (2014). Protein modifications by electrophilic lipoxidation products: adduct formation, chemical strategies and tandem mass spectrometry for their detection and identification. Mass Spectrom Rev, 33(3), 157-182. PMCID: PMC4138024

Vincenzi, S., Bierma, J., Wickramasekara, S. I., Curioni, A., Gazzola, D., & Bakalinsky, A. T. (2014). Characterization of a grape class IV chitinase. J Agric Food Chem, 62(24), 5660-5668. PMCID: PMC4216234

Voinov, V. G., Bennett, S. E., Beckman, J. S., & Barofsky, D. F. (2014). ECD of tyrosine phosphorylation in a triple quadrupole mass spectrometer with a radio-frequency-free electromagnetostatic cell. J Am Soc Mass Spectrom, 25(10), 1730-1738. PMCID: PMC4163116

Watson, G. W., Wickramasekara, S., Palomera-Sanchez, Z., Black, C., Maier, C. S., Williams, D. E., Dashwood, R. H., & Ho, E. (2014). SUV39H1/H3K9me3 attenuates sulforaphane-induced apoptotic signaling in PC3 prostate cancer cells. Oncogenesis, 3, e131. PMCID: PMC4275561

Yang, L., Broderick, D., Jiang, Y., Hsu, V., & Maier, C. S. (2014). Conformational dynamics of human FXR-LBD ligand interactions studied by hydrogen/deuterium exchange mass spectrometry: insights into the antagonism of the hypolipidemic agent Z-guggulsterone. Biochim Biophys Acta, 1844(9), 1684-1693. PMCID: PMC4137978

Young, B. S., Chase, D. T., Marshall, J. L., Vonnegut, C. L., Zakharov, L. N., & Haley, M. M. (2014). Synthesis and Properties of Fully-Conjugated Indacenedithiophenes. Chem Sci, 5(3), 1008-1014. PMCID: PMC3979547

Zamzow, D. R., Elias, V., Legette, L. L., Choi, J., Stevens, J. F., & Magnusson, K. R. (2014). Xanthohumol improved cognitive flexibility in young mice. Behav Brain Res, 275, 1-10. PMCID: PMC4281268

Mass Spectrometry Center Publications_2013

Chimploy, K., Song, S., Wheeler, L. J., & Mathews, C. K. (2013). Ribonucleotide reductase association with mammalian liver mitochondria. J Biol Chem, 288(18), 13145-13155. PMCID: PMC3642355

Deluc, S. G. M. S. M. G. (2013). An Analytical Method to Quantify Three Plant Hormone Families in Grape Berry Using Liquid Chromatography and Multiple Reaction Monitoring Mass Spectrometry. Recent Advances in Phytochemistry, 42, 19-36.

Eaton, H. L., Duringer, J. M., Murty, L. D., & Craig, A. M. (2013). Anaerobic bioremediation of RDX by ovine whole rumen fluid and pure culture isolates. Appl Microbiol Biotechnol, 97(8), 3699-3710. PMID: 22688904

Emerson, C. R., Zakharov, L. N., & Blakemore, P. R. (2013). Investigation of functionalized alpha-chloroalkyllithiums for a stereospecific reagent-controlled homologation approach to the analgesic alkaloid (-)-epibatidine. Chemistry, 19(48), 16342-16356. PMID: 24127119

Giarrizzo, J. G., Murty, L., Tanaree, D., Walker, K., & Craig, A. M. (2013). Validation of a novel extraction method for studying hexahydro-1,3,5-trinitro-1,3,5 triazine (RDX) biodegradation by ruminal microbiota. J Chromatogr B Analyt Technol Biomed Life Sci, 925, 70-75. PMID: 23523880

Kirkwood, J. S., Legette, L. L., Miranda, C. L., Jiang, Y., & Stevens, J. F. (2013). A metabolomics-driven elucidation of the anti-obesity mechanisms of xanthohumol. J Biol Chem, 288(26), 19000-19013. PMCID: PMC3696674

Kirkwood, J. S., Maier, C., & Stevens, J. F. (2013). Simultaneous, untargeted metabolic profiling of polar and nonpolar metabolites by LC-Q-TOF mass spectrometry. Curr Protoc Toxicol, Chapter 4, Unit4 39. PMCID: PMC3707319

Lebold, K. M., Kirkwood, J. S., Taylor, A. W., Choi, J., Barton, C. L., Miller, G. W., La Du, J., Jump, D. B., Stevens, J. F., Tanguay, R. L., & Traber, M. G. (2013). Novel liquid chromatography-mass spectrometry method shows that vitamin E deficiency depletes arachidonic and docosahexaenoic acids in zebrafish (Danio rerio) embryos. Redox Biol, 2, 105-113. PMCID: PMC3887274

Legette, L. L., Luna, A. Y., Reed, R. L., Miranda, C. L., Bobe, G., Proteau, R. R., & Stevens, J. F. (2013). Xanthohumol lowers body weight and fasting plasma glucose in obese male Zucker fa/fa rats. Phytochemistry, 91, 236-241. PMID: 22640929

Legette, L. L., Reed, R. L., Murty, L., Maier, C. S., & Stevens, J. F. (2013). Application of Paper Strip Extraction in Combination with LC-MS-MS in Pharmacokinetics. Spectroscopy (Springf), 39(10), s18-s25. PMCID: PMC4201118

Lu, L., Zhang, W., Nam, S., Horne, D. A., Jove, R., & Carter, R. G. (2013). Amphidinolide B: total synthesis, structural investigation, and biological evaluation. J Org Chem, 78(6), 2213-2247. PMCID: PMC3631602

Mahapatra, S., & Carter, R. G. (2013). Exploiting hidden symmetry in natural products: total syntheses of amphidinolides C and F. J Am Chem Soc, 135(29), 10792-10803. PMCID: PMC3786714

McNamara, M., Tzeng, S. C., Maier, C., Wu, M., & Bermudez, L. E. (2013). Surface-exposed proteins of pathogenic mycobacteria and the role of cu-zn superoxide dismutase in macrophages and neutrophil survival. Proteome Sci, 11(1), 45. PMCID: PMC4176128

Milovancev, M., Hilgart-Martiszus, I., McNamara, M. J., Goodall, C. P., Seguin, B., Bracha, S., & Wickramasekara, S. I. (2013). Comparative analysis of the surface exposed proteome of two canine osteosarcoma cell lines and normal canine osteoblasts. BMC Vet Res, 9, 116. PMCID: PMC3684535

Rhoads, T. W., Williams, J. R., Lopez, N. I., Morre, J. T., Bradford, C. S., & Beckman, J. S. (2013). Using theoretical protein isotopic distributions to parse small-mass-difference post-translational modifications via mass spectrometry. J Am Soc Mass Spectrom, 24(1), 115-124. PMCID: PMC4119010

Saha, M., & Carter, R. G. (2013). Toward a unified approach for the lycopodines: synthesis of 10-hydroxylycopodine, deacetylpaniculine, and paniculine. Org Lett, 15(4), 736-739. PMCID: PMC3616490

Salih, M. Q., & Beaudry, C. M. (2013). Enantioselective Ullmann ether couplings: syntheses of (-)-myricatomentogenin, (-)-jugcathanin, (+)-galeon, and (+)-pterocarine. Org Lett, 15(17), 4540-4543. PMID: 23947738

Speight, L. C., Muthusamy, A. K., Goldberg, J. M., Warner, J. B., Wissner, R. F., Willi, T. S., Woodman, B. F., Mehl, R. A., & Petersson, E. J. (2013). Efficient synthesis and in vivo incorporation of acridon-2-ylalanine, a fluorescent amino acid for lifetime and Forster resonance energy transfer/luminescence resonance energy transfer studies. J Am Chem Soc, 135(50), 18806-18814. PMCID: PMC4041393

Sun, X., & Blakemore, P. R. (2013). Programmed synthesis of a contiguous stereotriad motif by triple stereospecific reagent-controlled homologation. Org Lett, 15(17), 4500-4503. PMID: 23947788

Thornburg, C. C., Cowley, E. S., Sikorska, J., Shaala, L. A., Ishmael, J. E., Youssef, D. T., & McPhail, K. L. (2013). Apratoxin H and apratoxin A sulfoxide from the Red Sea cyanobacterium Moorea producens. J Nat Prod, 76(9), 1781-1788. PMCID: PMC3969888

Veerasamy, N., Carlson, E. C., Collett, N. D., Saha, M., & Carter, R. G. (2013). Enantioselective approach to quinolizidines: total synthesis of cermizine D and formal syntheses of senepodine G and cermizine C. J Org Chem, 78(10), 4779-4800. PMCID: PMC3711505

Wang, Z., Kirkwood, J. S., Taylor, A. W., Stevens, J. F., Leid, M., Ganguli-Indra, G., & Indra, A. K. (2013). Transcription factor Ctip2 controls epidermal lipid metabolism and regulates expression of genes involved in sphingolipid biosynthesis during skin development. J Invest Dermatol, 133(3), 668-676. PMCID: PMC3556343

Wickramasekara, S. I., Zandkarimi, F., Morre, J., Kirkwood, J., Legette, L., Jiang, Y., Gombart, A. F., Stevens, J. F., & Maier, C. S. (2013). Electrospray Quadrupole Travelling Wave Ion Mobility Time-of-Flight Mass Spectrometry for the Detection of Plasma Metabolome Changes Caused by Xanthohumol in Obese Zucker (fa/fa) Rats. Metabolites, 3(3), 701-717. PMCID: PMC3901285

Zandkarimi, F., Wickramasekara, S., Morre, J., Stevens J. F. and Maier, C. S. (2013). Electrospray ionization traveling wave ion mobility mass spectrometry for the analysis of plant phenolics: An approach for separation of regioisomers. Recent Advances in Phytochemistry, 34, 21-42.

Zhao, P., & Beaudry, C. M. (2013). Total synthesis of (+/-)-cavicularin: control of pyrone Diels-Alder regiochemistry using isomeric vinyl sulfones. Org Lett, 15(2), 402-405. PMID: 23301524

Zhu, Z. Q., & Beaudry, C. M. (2013). Structural revision of garuganin IV and 1,9'-didesmethylgaruganin III through total synthesis. J Org Chem, 78(7), 3336-3341. PMID: 23480215

Zhu, Z. Q., Salih, M. Q., Fynn, E., Bain, A. D., & Beaudry, C. M. (2013). The garuganin and garugamblin diarylether heptanoids: total synthesis and determination of chiral properties using dynamic NMR. J Org Chem, 78(7), 2881-2896. PMID: 23461387

Mass Spectrometry Center Publications_2012

Brewer, A. J., Ort, C., Banta-Green, C. J., Berset, J. D., & Field, J. A. (2012). Normalized diurnal and between-day trends in illicit and legal drug loads that account for changes in population. Environ Sci Technol, 46(15), 8305-8314. PMCID: PMC3462072

Engle, J. M., Carroll, C. N., Johnson, D. W., & Haley, M. M. (2012). Synthesis and optoelectronic properties of 2,6-bis(2-anilinoethynyl)pyridine scaffolds. Chem Sci, 3(4), 1105-1110. PMCID: PMC4201053

Filtz, T. M., Vogel, W. K., Zhang, L. J., Liu, X., Arbogast, B., Zweber, A., Maier, C. S., & Leid, M. (2012). Kinetically differentiated post-translational modifications in a transcription factor, Bcl11b. Faseb Journal, 26.

Gouthu S, S. P., Morré J, Maier CS, Deluc LG. (2012). Berry nitrogen status altered by cover cropping: Effects on berry hormone dynamics, growth and amino acid composition of Pinot Noir. Food Chem, 135, 1-8.

Han, B., Hare, M., Wickramasekara, S., Fang, Y., & Maier, C. S. (2012). A comparative 'bottom up' proteomics strategy for the site-specific identification and quantification of protein modifications by electrophilic lipids. J Proteomics, 75(18), 5724-5733. PMCID: PMC3468693

Hernandez, R. V., Dwivedi, P., Patel, A., Nirudodhi, S., Duong, M., Maier, C. S., Venkataraman, A., & Narayanaswami, V. (2012). Structural Analysis of Human Apolipoprotein E3 by Fluorescence Spectroscopy, and Hydrogen/Deuterium Exchange Coupled to Mass Spectrometry. Biophysical Journal, 102(3), 46a-46a.

Jeknic, Z., Morre, J. T., Jeknic, S., Jevremovic, S., Subotic, A., & Chen, T. H. (2012). Cloning and functional characterization of a gene for capsanthin-capsorubin synthase from tiger lily (Lilium lancifolium Thunb. 'Splendens'). Plant and Cell Physiology, 53(11), 1899-1912. PMCID: PMC3494009

Kirkwood, J. S., Lebold, K. M., Miranda, C. L., Wright, C. L., Miller, G. W., Tanguay, R. L., Barton, C. L., Traber, M. G., & Stevens, J. F. (2012). Vitamin C deficiency activates the purine nucleotide cycle in zebrafish. J Biol Chem, 287(6), 3833-3841. PMCID: PMC3281694

Legette, L., Ma, L., Reed, R. L., Miranda, C. L., Christensen, J. M., Rodriguez-Proteau, R., & Stevens, J. F. (2012). Pharmacokinetics of xanthohumol and metabolites in rats after oral and intravenous administration. Mol Nutr Food Res, 56(3), 466-474. PMCID: PMC3401605

Lorang, J., Kidarsa, T., Bradford, C. S., Gilbert, B., Curtis, M., Tzeng, S. C., Maier, C. S., & Wolpert, T. J. (2012). Tricking the guard: exploiting plant defense for disease susceptibility. Science, 338(6107), 659-662. PMCID: PMC4125361

Marley, K., Maier, C. S., & Helfand, S. C. (2012). Phosphotyrosine enrichment identifies focal adhesion kinase and other tyrosine kinases for targeting in canine hemangiosarcoma. Vet Comp Oncol, 10(3), 214-222. PMID: 22487216

McNamara, M., Danelishvili, L., & Bermudez, L. E. (2012). The Mycobacterium avium ESX-5 PPE protein, PPE25-MAV, interacts with an ESAT-6 family Protein, MAV_2921, and localizes to the bacterial surface. Microb Pathog, 52(4), 227-238. PMCID: PMC3883564

McNamara, M., Tzeng, S. C., Maier, C., Zhang, L., & Bermudez, L. E. (2012). Surface proteome of "Mycobacterium avium subsp. hominissuis" during the early stages of macrophage infection. Infect Immun, 80(5), 1868-1880. PMCID: PMC3347459

Mellies, J. L., Thomas, K., Turvey, M., Evans, N. R., Crane, J., Boedeker, E., & Benison, G. C. (2012). Zinc-induced envelope stress diminishes type III secretion in enteropathogenic Escherichia coli. BMC Microbiol, 12, 123. PMCID: PMC3438133

Place, B. J., & Field, J. A. (2012). Identification of novel fluorochemicals in aqueous film-forming foams used by the US military. Environ Sci Technol, 46(13), 7120-7127. PMCID: PMC3390017

Trumbull, K. A., McAllister, D., Gandelman, M. M., Fung, W. Y., Lew, T., Brennan, L., Lopez, N., Morre, J., Kalyanaraman, B., & Beckman, J. S. (2012). Diapocynin and apocynin administration fails to significantly extend survival in G93A SOD1 ALS mice. Neurobiol Dis, 45(1), 137-144. PMCID: PMC3710723

Zandkarimi, F., Nirudodhi, S., Stevens, J. F., & Maier, C. S. (2012). Plant Phenolics Analysis Using Electrospray Ion Mobility Time-of-Flight Mass Spectrometry. Pharmaceutical Biology, 50(5), 648-648.

Zasada, I. A., Weiland, J. E., Reed, R. L., & Stevens, J. F. (2012). Activity of meadowfoam (Limnanthes alba) seed meal glucolimnanthin degradation products against soilborne pathogens. J Agric Food Chem, 60(1), 339-345. PMCID: PMC4215540

Zhang, L. J., Vogel, W. K., Liu, X., Topark-Ngarm, A., Arbogast, B. L., Maier, C. S., Filtz, T. M., & Leid, M. (2012). Coordinated regulation of transcription factor Bcl11b activity in thymocytes by the mitogen-activated protein kinase (MAPK) pathways and protein sumoylation. J Biol Chem, 287(32), 26971-26988. PMCID: PMC3411033

Mass Spectrometry Center Publications_2011

Backe, W. J., Ort, C., Brewer, A. J., & Field, J. A. (2011). Analysis of androgenic steroids in environmental waters by large-volume injection liquid chromatography tandem mass spectrometry. Analytical Chemistry, 83(7), 2622-2630. PMCID: PMC4142814

Chavez, J. D., Wu, J., Bisson, W., & Maier, C. S. (2011). Site-specific proteomic analysis of lipoxidation adducts in cardiac mitochondria reveals chemical diversity of 2-alkenal adduction. J Proteomics, 74(11), 2417-2429. PMCID: PMC3199298

Clarke, J., Riedl, K., Bella, D., Schwartz, S., Stevens, J., & Ho, E. (2011). Comparison of the response to broccoli sprouts or broccoli supplement consumption in human subjects. Faseb Journal, 25.

Clarke, J. D., Hsu, A., Riedl, K., Bella, D., Schwartz, S. J., Stevens, J. F., & Ho, E. (2011). Bioavailability and inter-conversion of sulforaphane and erucin in human subjects consuming broccoli sprouts or broccoli supplement in a cross-over study design. Pharmacol Res, 64(5), 456-463. PMCID: PMC3183106

Clarke, J. D., Hsu, A., Williams, D. E., Dashwood, R. H., Stevens, J. F., Yamamoto, M., & Ho, E. (2011). Metabolism and tissue distribution of sulforaphane in Nrf2 knockout and wild-type mice. Pharm Res, 28(12), 3171-3179. PMCID: PMC3253624

Clarke, J. D., Riedl, K., Bella, D., Schwartz, S. J., Stevens, J. F., & Ho, E. (2011). Comparison of isothiocyanate metabolite levels and histone deacetylase activity in human subjects consuming broccoli sprouts or broccoli supplement. J Agric Food Chem, 59(20), 10955-10963.

Dreher, T. W., Brown, N., Bozarth, C. S., Schwartz, A. D., Riscoe, E., Thrash, C., Bennett, S. E., Tzeng, S. C., & Maier, C. S. (2011). A freshwater cyanophage whose genome indicates close relationships to photosynthetic marine cyanomyophages. Environ Microbiol, 13(7), 1858-1874. PMCID: PMC4185292

Forsberg, N. D., Rodriguez-Proteau, R., Ma, L., Morre, J., Christensen, J. M., Maier, C. S., Jenkins, J. J., & Anderson, K. A. (2011). Organophosphorus pesticide degradation product in vitro metabolic stability and time-course uptake and elimination in rats following oral and intravenous dosing. Xenobiotica, 41(5), 422-429. PMCID: PMC3148839

Han, B., Gross, H., McPhail, K. L., Goeger, D., Maier, C. S., & Gerwick, W. H. (2011). Wewakamide A and guineamide G, cyclic depsipeptides from the marine cyanobacteria Lyngbya semiplena and Lyngbya majuscula. J Microbiol Biotechnol, 21(9), 930-936. PMID: 21952369

Kuiper, H. C., Bruno, R. S., Traber, M. G., & Stevens, J. F. (2011). Vitamin C supplementation lowers urinary levels of 4-hydroperoxy-2-nonenal metabolites in humans. Free Radic Biol Med, 50(7), 848-853. PMCID: PMC3046321

Kuiper, H. C., & Stevens, J. F. (2011). LC-MS/MS quantitation of mercapturic acid conjugates of lipid peroxidation products as markers of oxidative stress. Curr Protoc Toxicol, Chapter 17, Unit17 14 12. PMCID: PMC3062851

Nirudodhi, S., Parsonage, D., Karplus, P. A., Poole, L. B., & Maier, C. S. (2011). Conformational studies of the robust 2-Cys peroxiredoxin Salmonella typhimurium AhpC by solution phase hydrogen/deuterium (H/D) exchange monitored by electrospray ionization mass spectrometry. Int J Mass Spectrom, 302(1-3), 93-100. PMCID: PMC3079231

Nyarko, A., & Barbar, E. (2011). Light chain-dependent self-association of dynein intermediate chain. J Biol Chem, 286(2), 1556-1566. PMCID: PMC3020764

Rhoads, T. W., Lopez, N. I., Zollinger, D. R., Morre, J. T., Arbogast, B. L., Maier, C. S., DeNoyer, L., & Beckman, J. S. (2011). Measuring copper and zinc superoxide dismutase from spinal cord tissue using electrospray mass spectrometry. Anal Biochem, 415(1), 52-58. PMCID: PMC3118564

Sowell, S. M., Abraham, P. E., Shah, M., Verberkmoes, N. C., Smith, D. P., Barofsky, D. F., & Giovannoni, S. J. (2011). Environmental proteomics of microbial plankton in a highly productive coastal upwelling system. ISME J, 5(5), 856-865. PMCID: PMC3105774

Traber, M. G., & Stevens, J. F. (2011). Vitamins C and E: beneficial effects from a mechanistic perspective. Free Radic Biol Med, 51(5), 1000-1013. PMCID: PMC3156342

Voinov, V. G., Deinzer, M. L., Beckman, J. S., & Barofsky, D. F. (2011). Electron capture, collision-induced, and electron capture-collision induced dissociation in Q-TOF. J Am Soc Mass Spectrom, 22(4), 607-611. PMCID: PMC4285558

Wang, J., Zhang, J., Arbogast, B., & Maier, C. S. (2011). Tandem mass spectrometric characterization of thiol peptides modified by the chemoselective cationic sulfhydryl reagent (4-iodobutyl)triphenylphosphonium--effects of a cationic thiol derivatization on peptide fragmentation. J Am Soc Mass Spectrom, 22(10), 1771-1783. PMCID: PMC3187551

Wu, J., Stevens, J. F., & Maier, C. S. (2011). Mass spectrometry-based quantification of myocardial protein adducts with acrolein in an in vivo model of oxidative stress. Mol Nutr Food Res, 55(9), 1401-1410. PMCID: PMC3517132

Young, B. S., Kohler, F., Herges, R., & Haley, M. M. (2011). Phenanthrene-fused azo-ene-ynes: synthesis of dibenzo[f,h]cinnoline and dibenzo[e,g]isoindazole derivatives. J Org Chem, 76(20), 8483-8487. PMCID: PMC3888224

Mass Spectrometry Center Publications_2010

Bythell, B. J., Csonka, I. P., Suhai, S., Barofsky, D. F., & Paizs, B. (2010). Gas-phase structure and fragmentation pathways of singly protonated peptides with N-terminal arginine. Journal of Physical Chemistry B, 114(46), 15092-15105. PMCID: PMC3664278

Chavez, J., Chung, W. G., Miranda, C. L., Singhal, M., Stevens, J. F., & Maier, C. S. (2010). Site-specific protein adducts of 4-hydroxy-2(E)-nonenal in human THP-1 monocytic cells: protein carbonylation is diminished by ascorbic acid. Chem Res Toxicol, 23(1), 37-47. PMCID: PMC2825578

Chavez, J. D., Bisson, W. H., & Maier, C. S. (2010). A targeted mass spectrometry-based approach for the identification and characterization of proteins containing alpha-aminoadipic and gamma-glutamic semialdehyde residues. Anal Bioanal Chem, 398(7-8), 2905-2914. PMCID: PMC3071856

Fotso, S., Santosa, D. A., Saraswati, R., Yang, J., Mahmud, T., Zabriskie, T. M., & Proteau, P. J. (2010). Modified phenazines from an Indonesian Streptomyces sp. J Nat Prod, 73(3), 472-475. PMCID: PMC2846220

Gross, H., McPhail, K. L., Goeger, D. E., Valeriote, F. A., & Gerwick, W. H. (2010). Two cytotoxic stereoisomers of malyngamide C, 8-epi-malyngamide C and 8-O-acetyl-8-epi-malyngamide C, from the marine cyanobacterium Lyngbya majuscula. Phytochemistry, 71(14-15), 1729-1735. PMCID: PMC2952490

Hall, J., Song, Y., Karplus, P. A., & Barbar, E. (2010). The crystal structure of dynein intermediate chain-light chain roadblock complex gives new insights into dynein assembly. J Biol Chem, 285(29), 22566-22575. PMCID: PMC2903378

Jha, S. S., Danelishvili, L., Wagner, D., Maser, J., Li, Y. J., Moric, I., Vogt, S., Yamazaki, Y., Lai, B., & Bermudez, L. E. (2010). Virulence-related Mycobacterium avium subsp hominissuis MAV_2928 gene is associated with vacuole remodeling in macrophages. BMC Microbiol, 10, 100. PMCID: PMC2882924

Kesinger, N. G., Langsdorf, B. L., Yokochi, A. F., Miranda, C. L., & Stevens, J. F. (2010). Formation of a vitamin C conjugate of acrolein and its paraoxonase-mediated conversion into 5,6,7,8-tetrahydroxy-4-oxooctanal. Chem Res Toxicol, 23(4), 836-844. PMCID: PMC2858635

Kocisek, J., Papp, P., Mach, P., Vasil'ev, Y. V., Deinzer, M. L., & Matejcik, S. (2010). Resonance electron capture by serine. J Phys Chem A, 114(4), 1677-1683. PMID: 20043683

Kuiper, H. C., Langsdorf, B. L., Miranda, C. L., Joss, J., Jubert, C., Mata, J. E., & Stevens, J. F. (2010). Quantitation of mercapturic acid conjugates of 4-hydroxy-2-nonenal and 4-oxo-2-nonenal metabolites in a smoking cessation study. Free Radic Biol Med, 48(1), 65-72. PMCID: PMC2818256

Maier, C. S., Chavez, J., Wang, J., & Wu, J. (2010). Protein adducts of aldehydic lipid peroxidation products identification and characterization of protein adducts using an aldehyde/keto-reactive probe in combination with mass spectrometry. Methods Enzymol, 473, 305-330. PMCID: PMC4191911

McPhail, K. L., Armstrong, D. J., Azevedo, M. D., Banowetz, G. M., & Mills, D. I. (2010). 4-Formylaminooxyvinylglycine, an herbicidal germination-arrest factor from Pseudomonas rhizosphere bacteria. J Nat Prod, 73(11), 1853-1857. PMCID: PMC3049220

Peluso, M. R., Miranda, C. L., Hobbs, D. J., Proteau, R. R., & Stevens, J. F. (2010). Xanthohumol and related prenylated flavonoids inhibit inflammatory cytokine production in LPS-activated THP-1 monocytes: structure-activity relationships and in silico binding to myeloid differentiation protein-2 (MD-2). Planta Med, 76(14), 1536-1543. PMID: 20309792

Shchukin, P. V., Muftakhov, M. V., Morre, J., Deinzer, M. L., & Vasil'ev, Y. V. (2010). High resolution mass analysis of N- and C-terminal negative ions resulting from resonance electron capture by aliphatic amino acids. J Chem Phys, 132(23), 234306. PMID: 20572704

Stowell, C., Wang, L., Arbogast, B., Lan, J. Q., Cioffi, G. A., Burgoyne, C. F., & Zhou, A. (2010). Retinal proteomic changes under different ischemic conditions - implication of an epigenetic regulatory mechanism. Int J Physiol Pathophysiol Pharmacol, 2(2), 148-160. PMCID: PMC2926809

Takata, T., Smith, J. P., Arbogast, B., David, L. L., & Lampi, K. J. (2010). Solvent accessibility of betaB2-crystallin and local structural changes due to deamidation at the dimer interface. Exp Eye Res, 91(3), 336-346. PMCID: PMC2926248

Veluthoor, S., Li, S., Kelsey, R. G., Dolan, M. C., Panella, N. A., & Karchesy, J. (2010). Two new diterpene phenols from Calocedrus decurrans. Nat Prod Commun, 5(4), 519-522. PMID: 20433063

Zeng, X., Massey Simonich, S. L., Robrock, K. R., Korytar, P., Alvarez-Cohen, L., & Barofsky, D. F. (2010). Application of a congener-specific debromination model to study photodebromination, anaerobic microbial debromination, and FE0 reduction of polybrominated diphenyl ethers. Environ Toxicol Chem, 29(4), 770-778. PMCID: PMC3059408

Mass Spectrometry Center Publications_2009

Aminin, D. L., Koy, C., Dmitrenok, P. S., Muller-Hilke, B., Koczan, D., Arbogast, B., Silchenko, A. A., Kalinin, V. I., Avilov, S. A., Stonik, V. A., Collin, P. D., Thiesen, H. J., Deinzer, M. L., & Glocker, M. O. (2009). Immunomodulatory effects of holothurian triterpene glycosides on mammalian splenocytes determined by mass spectrometric proteome analysis. J Proteomics, 72(5), 886-906. PMID: 19410666

Chung, W. G., Miranda, C. L., Stevens, J. F., & Maier, C. S. (2009). Hop proanthocyanidins induce apoptosis, protein carbonylation, and cytoskeleton disorganization in human colorectal adenocarcinoma cells via reactive oxygen species. Food Chem Toxicol, 47(4), 827-836. PMCID: PMC2888903

Gomez, L. A., Monette, J. S., Chavez, J. D., Maier, C. S., & Hagen, T. M. (2009). Supercomplexes of the mitochondrial electron transport chain decline in the aging rat heart. Arch Biochem Biophys, 490(1), 30-35. PMCID: PMC2762268

Hall, A., Parsonage, D., Horita, D., Karplus, P. A., Poole, L. B., & Barbar, E. (2009). Redox-dependent dynamics of a dual thioredoxin fold protein: evolution of specialized folds. Biochemistry, 48(25), 5984-5993. PMCID: PMC2744581

Hall, J., Karplus, P. A., & Barbar, E. (2009). Multivalency in the assembly of intrinsically disordered Dynein intermediate chain. J Biol Chem, 284(48), 33115-33121. PMCID: PMC2785153

Harder, M. E., Malencik, D. A., Yan, X., Broderick, D., Leid, M., Anderson, S. R., Deinzer, M. L., & Schimerlik, M. I. (2009). Equilibrium unfolding of the retinoid X receptor ligand binding domain and characterization of an unfolding intermediate. Biophys Chem, 141(1), 1-10. PMCID: PMC2805030

Isaacson, C. W., Kleber, M., & Field, J. A. (2009). Quantitative analysis of fullerene nanomaterials in environmental systems: a critical review. Environ Sci Technol, 43(17), 6463-6474. PMCID: PMC2749266

Kesinger, N. G., & Stevens, J. F. (2009). Covalent interaction of ascorbic acid with natural products. Phytochemistry, 70(17-18), 1930-1939. PMCID: PMC278791

McClintock, S. P., Forster, N., Herges, R., & Haley, M. M. (2009). Synthesis of alpha-ketoester- and alpha-hydroxyester-substituted isoindazoles via the thermodynamic coarctate cyclization of ester-terminated azo-ene-yne systems. J Org Chem, 74(17), 6631-6636. PMCID: PMC4154358

Miranda, C. L., Reed, R. L., Kuiper, H. C., Alber, S., & Stevens, J. F. (2009). Ascorbic acid promotes detoxification and elimination of 4-hydroxy-2(E)-nonenal in human monocytic THP-1 cells. Chem Res Toxicol, 22(5), 863-874. PMCID: PMC2730585

Scheri, R. C., Lee, J., Barofsky, D. F., & Curtis, L. R. (2009). Chlordecone increased subcellular distribution of scavenger receptor class B type II to murine hepatic microsomes without altering cytosolic cholesterol binding proteins. Toxicol Lett, 191(1), 20-25. PMCID: PMC4126231

Stevens, J. F., Reed, R. L., Alber, S., Pritchett, L., & Machado, S. (2009). Herbicidal activity of glucosinolate degradation products in fermented meadowfoam ( Limnanthes alba ) seed meal. J Agric Food Chem, 57(5), 1821-1826. PMCID: PMC2880616

Vasil'ev, Y. V., Figard, B. J., Morre, J., & Deinzer, M. L. (2009). Fragmentation of peptide negative molecular ions induced by resonance electron capture. J Chem Phys, 131(4), 044317. PMCID: PMC2730708

Voinov, V. G., Beckman, J. S., Deinzer, M. L., & Barofsky, D. F. (2009). Electron-capture dissociation (ECD), collision-induced dissociation (CID) and ECD/CID in a linear radio-frequency-free magnetic cell. Rapid Commun Mass Spectrom, 23(18), 3028-3030. PMCID: PMC3057201

Voinov, V. G., Deinzer, M. L., & Barofsky, D. F. (2009). Radio-frequency-free cell for electron capture dissociation in tandem mass spectrometry. Analytical Chemistry, 81(3), 1238-1243. PMCID: PMC3066179

Yan, X., & Maier, C. S. (2009). Hydrogen/deuterium exchange mass spectrometry. Methods Mol Biol, 492, 255-271.

Mass Spectrometry Center Publications_2008

Chung, W. G., & Maier, C. S. (2008). Identification and characterization of oxylipid-protein and peptide conjugates by mass spectrometry. Curr Protoc Toxicol, Chapter 17, Unit 17 19. PMID: 23045005

Chung, W. G., Miranda, C. L., & Maier, C. S. (2008). Detection of carbonyl-modified proteins in interfibrillar rat mitochondria using N'-aminooxymethylcarbonylhydrazino-D-biotin as an aldehyde/keto-reactive probe in combination with Western blot analysis and tandem mass spectrometry. Electrophoresis, 29(6), 1317-1324. PMID: 18348219

Henderson, M. C., Siddens, L. K., Morre, J. T., Krueger, S. K., & Williams, D. E. (2008). Metabolism of the anti-tuberculosis drug ethionamide by mouse and human FMO1, FMO2 and FMO3 and mouse and human lung microsomes. Toxicol Appl Pharmacol, 233(3), 420-427. PMCID: PMC2626250

Huset, C. A., Chiaia, A. C., Barofsky, D. F., Jonkers, N., Kohler, H. P., Ort, C., Giger, D. W., & Field, J. A. (2008). Occurrence and mass flows of fluorochemicals in the Glatt Valley watershed, Switzerland. Environ Sci Technol, 42(17), 6369-6377. PMCID: PMC3056649

Kuiper, H. C., Miranda, C. L., Sowell, J. D., & Stevens, J. F. (2008a). Mercapturic acid conjugates of 4-hydroxy-2-nonenal and 4-oxo-2-nonenal metabolites are in vivo markers of oxidative stress. J Biol Chem, 283(25), 17131-17138. PMCID: PMC2427341

Schilke, K. F., & Kelly, C. (2008). Activation of immobilized lipase in non-aqueous systems by hydrophobic poly-DL-tryptophan tethers. Biotechnol Bioeng, 101(1), 9-18. PMCID: PMC4124937

Stevens, J. F., & Maier, C. S. (2008). Acrolein: sources, metabolism, and biomolecular interactions relevant to human health and disease. Mol Nutr Food Res, 52(1), 7-25. PMCID: PMC2423340

Stevens, J. F., Reed, R. L., & Morre, J. T. (2008). Characterization of phytoecdysteroid glycosides in Meadowfoam (Limnanthes alba) seed meal by positive and negative ion LC-MS/MS. J Agric Food Chem, 56(11), 3945-3952. PMCID: PMC2574805

Voinov, V. G., Deinzer, M. L., & Barofsky, D. F. (2008). Electron capture dissociation in a linear radiofrequency-free magnetic cell. Rapid Commun Mass Spectrom, 22(19), 3087-3088. PMCID: PMC3045275

Xu, H., Minagawa, K., Bai, L., Deng, Z., & Mahmud, T. (2008). Catalytic analysis of the validamycin glycosyltransferase (ValG) and enzymatic production of 4''-epi-validamycin A. J Nat Prod, 71(7), 1233-1236. PMCID: PMC2574543

Zeng, X., Massey Simonich, S. L., Robrock, K. R., Korytar, P., Alvarez-Cohen, L., & Barofsky, D. F. (2008). Development and validation of a congener-specific photodegradation model for polybrominated diphenyl ethers. Environ Toxicol Chem, 27(12), 2427-2435. PMCID: PMC3056650